PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P23080_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 230aa    MW: 25361.5 Da    PI: 5.024
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P23080_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-1072119454
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            ++  rE+ RR+r+N++f eL +ll +    + +K++Ka+iL  A + + +L
  GSMUA_Achr3P23080_001  72 SKACREKMRRERLNDRFLELNSLLDPG---NPPKMDKAAILSDAARLVTQL 119
                            5778**********************7...78************9988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-1460135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.99E-1066124No hitNo description
PROSITE profilePS5088812.80568119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-872119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-1373142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-974125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MGSTENPNWF LDCSLIDDIP DAGADFGWNP QGFDPASSVS VEIDSSFVNS DGLKEPGSAK  60
RSRSESCSNP ASKACREKMR RERLNDRFLE LNSLLDPGNP PKMDKAAILS DAARLVTQLR  120
NEAQKLKESN ESLQEKIKEL KAEKNELRDE KQKLKAERGS LEQQVKLLNA RSSYVPQPPL  180
VPTPYGAQGQ AAGHKLMVPI IGFPGFPMWQ YMPPSDVDTS QDADKCSPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009393337.11e-169PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-84ILR3_ARATH; Transcription factor ILR3
TrEMBLM0SH241e-169M0SH24_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P23080_0011e-169(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20233885
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-86bHLH family protein